Greek Yogurt Choc Chip Muffins (Low Sugar Recipe)

Name: Greek Yogurt Choc Chip Muffins (Low Sugar Recipe)
Prep time: 10 min
Cook time: 20 min
Total time: 30 min
Ingredients: 2.5 cups plain flour; 1 tablespoon baking powder; ½ teaspoon baking soda; ½ teaspoon salt; ⅓ cup sugar (I find this enough but some people might like to add a little more, say ½ cup sugar); 2 eggs (lightly whisked); ⅔ cup oil (I usually use canola oil, or a mixture of canola and olive oil, but any is fine); 1 cup Greek yogurt (I use authentic full fat strained Greek yogurt); ¼ cup milk (Actually, ¼ to ½ cup.); 1 teaspoon vanilla extract (optional); 1.5 cups chocolate chips

By Helen Schofield

on Oct 10, 2022

86 Comments

Jump to Recipe Rate Recipe

This post may contain affiliate links. Please read my disclosure for more info.

These Greek yogurt choc chip muffins are light and fluffy every time, packed full of protein and with only a little added sugar. They also happen to be REALLY quick and easy to make – ready in only 30 minutes.

Perfect for lunch boxes, afternoon snacks and last minute guests, you NEED these healthy chocolate chip muffins in your life!

Closeup of a Greek yogurt choc chip muffin on a pale beige plate and marble surface with more cakes and a striped blue tea towel behind.

Healthier chocolate chip muffins
Why you’ll love them
About the ingredients
How to make them
Helen’s top tips
Variations
Recipe FAQ
More favorite baking recipes
Greek Yogurt Choc Chip Muffins (Low Sugar Recipe) Recipe

Healthier chocolate chip muffins

We have a bit of a love-hate relationship with muffins in our house. Mr. Scrummy generally doesn’t like them, unless they happen to be these Greek yogurt blueberry muffins.

I certainly do like them, especially if they involve chocolate in any way, shape or form. However, I find café muffins mostly too sickly sweet.

My solution to this very serious problem (!) is to make these lower sugar light and fluffy Greek yogurt choc chip muffins at home. In my not-so-humble opinion, these are the best chocolate chip muffins ever (tongue slightly in cheek here, but they really are good muffins).

Why you’ll love them

Yes, Helen! You’ve discovered a healthy chocolate chip muffins recipe. Tell me all about it…

They’re light and fluffy with a lightly crispy top. Just like my blueberry muffins before them, these Greek yogurt choc chip muffins always seem to turn out well!

They are indeed healthier choc chip muffins than average. They’re protein-packed (hello Greek yogurt), and low in sugar with just 1⁄3 cup.

Ridiculously easy to make and hard to mess up. They’re made with oil, so there’s no creaming of butter and sugar. Just mix the wet ingredients into the dry. Perfect recipe for making with the kids!

Beautifully moist and tender since the oil and yogurt both add moisture.

Made with simple ingredients. You might already have everything in your pantry.

Chocolate chips in every bite! 😉

If this is going to call itself a chocolate chip muffin, it’s going to have plenty of chocolate chips in it.

5* Review

“Thank you SOOOO much for this recipe Helen! These turned out amazing and my husband and kids said they’re the best choc chip muffins they’ve ever had!” (Angie)

About the ingredients

Overhead view of all the ingredients needed to make Greek yogurt chocolate chip muffins including chocolate chips, eggs, milk, Greek yogurt, flour, baking powder, baking soda and salt, vanilla extract, oil and sugar.

As already mentioned, one of the great things about these choc chip muffins (that are on the healthier side!) is that you only need simple baking ingredients. I confess that I’ve not always been very accurate with the ingredient amounts, but they always turn out well.

Here’s what you need to know:

All-purpose/Plain flour: Nothing fancy here. Feel free to replace some of the white flour with white whole wheat flour, regular whole wheat (wholemeal) flour or gluten free flour. It works! You ‘may’ need to add a little extra milk with these alternative flours.

Baking powder and baking soda: You’ll add a whole tablespoon of baking powder since you’re using 2.5 cups of flour. Plus just a half teaspoon of baking soda.

Sugar: Just plain white sugar. 1⁄3 cup is enough for me since there are plenty of chocolate chips in the recipe for the perfect amount of sweetness. Feel free to increase the amount to ½ cup if you have a sweeter tooth.

Eggs: 2 large.

Oil: I usually use either canola oil, or a mixture of canola and light olive oil. Any vegetable oil, melted coconut oil or even melted butter would work, too.

Greek yogurt: A whole cup packs the protein into these muffins (protein muffins!). For the best results, always use authentic Greek yogurt which is just strained yogurt made of milk and yogurt cultures. Reduced fat (such as the blue Chobani) or full fat are both fine. Avoid the ‘Greek style’ yogurts that contain a lot of cream.

Milk: Just a little, to thin the batter to the right consistency.

Salt: Just half a teaspoon to bring out the other flavors.

Vanilla extract: Not essential, but just a teaspoon is nice.

Chocolate chips: I like dark, but milk is fine, too. I add a whole 1.5 cups for chocolate in every bite, but reduce this amount if you like. Feel free to use chocolate chunks instead of chips!

How to make them

The step-by-step guide below should help you make the recipe perfectly first time. Scroll down to the end for the full recipe including ingredient amounts.

Step 1: Preheat the oven and prepare the muffin tin(s) with paper liners. I also try to remember to spray the liners lightly with oil to stop them sticking.

Step 2: Stir together the dry ingredients in a large bowl – flour, baking powder and soda, salt, and the little bit of sugar.

Step 3: Stir together the wet ingredients – so eggs, oil, vanilla, yogurt, milk and vanilla if you like.

collage of 2 images showing Making the batter for Greek yogurt chocolate chip muffins

Step 4: Briefly mix the wet ingredients into the dry (no overmixing!), and fold in the choc chips!

collage of 2 images showing stirring the choc chips through the batter for Greek yogurt choc chip muffins

Step 5: Fill the liners with the muffin batter. You’ll get 12 to 18 muffins depending on the size. Sometimes I make small muffins, other times huge bakery style ones. Both work really well!

Step 6: Bake until nicely browned! The baking time can vary. You’ll need between 17 to 25 minutes, again depending on the size. Check with a skewer in the middle. When it comes out clean, the delicious yogurt muffins are ready!

Overhead view of a pan of just baked Greek yogurt choc chip muffins on a marble background with a blue and grey striped tea towel at the top.

Helen’s top tips

To get perfect choc chip muffins every time!

Once you’ve added the wet ingredients to the dry, don’t overmix. A few lumps are fine! This will make sure you get light and fluffy muffins every time.

If your batter doesn’t drop nicely into your muffin cases and looks too thick and lumpy, just add a drizzle more milk to thin it out a bit.

Lightly fold your chocolate chips in. Again, don’t overmix and risk heavy, chewy muffins.

These muffins do tend to stick to the muffin cases a bit when still warm. If you wait until the muffins are completely cool they’ll peel out of the cases really easily. If you want to eat them warm, just reheat for 15 seconds in the microwave! (no longer – you’ll ruin them!)

A Greek yogurt chocolate chip muffin ripped open to expose the inside on a paper liner and with another muffin in the background. — Light and fluffy, moist, and with a crispy top

Variations

For even healthier chocolate muffins, reduce the chocolate chips to just ½ to 1 cup. Replace the rest with some fresh or frozen fruit – raspberries, blackberries or chopped pear (nice and sweet!) comes to mind.

Replace some of the chocolate chips with chopped nuts and/or dried fruit such as sultanas or cranberries.

I use almost exactly the same recipe for these Greek yogurt choc chip muffins as for my low sugar Greek yogurt blueberry muffins (they get rave reviews!). Except I add a little more sugar to the blueberry muffins to compensate for the lack of chocolate.

Got overripe bananas? Try this Greek yogurt banana muffin recipe as well. With caramel chips, but also a healthier, low sugar (and oil) recipe.

Recipe FAQ

How do you store these?

These yogurt muffins will keep well in an airtight container at room temperature for around 3 days, or in the fridge for around 5 days.

Can you freeze yogurt muffins?

Yes! You can freeze these Greek yogurt chocolate chip muffins in Ziploc bags for up to 3 months. Then defrost and reheat for 20-30 seconds in the microwave or a few minutes in the oven to get that freshly baked vibe again.

How can I make these dairy free?

Try making them with coconut Greek style yogurt. Check that it’s made with coconut milk and isn’t just coconut flavored yogurt. Remember to also replace the milk with a non-dairy milk such as almond, oat or soy.

Can I make mini chocolate chip muffins instead?

Yes, of course! Bake for just 10 to 13 minutes or until well risen and browned and a skewer pushed into the middle comes out clean. Check after 10 minutes and then if necessary every minute after that (a few minutes too long could ruin them).

Greek yogurt choc chip muffins on a white plate from above with more on a cooling rack in the corner

More favorite baking recipes

Another reminder to try these equally delicious Greek yogurt blueberry muffins too (the best blueberry muffins ever). These Greek yogurt banana muffins are pretty good, too!

These soft-centred triple chocolate muffins certainly aren’t healthy, but sometimes when you’re going to eat dessert you’re going to do it properly!

These gingerbread muffins with salted caramel icing are perfect for any special occasion, especially birthday or engagement parties, baby showers, and Christmas parties.

Here’s another go-to breakfast treat for you: delicious ooey, gooey 1-hour cinnamon scrolls. Try them once and they’ll become another favorite baking recipe!

Also check out this list of 25 low sugar cakes (that still taste great!).

IF YOU MAKE THIS RECIPE, LET ME KNOW HOW YOU GET ON BY LEAVING A COMMENT AND RATING BELOW… AND DON’T FORGET TO SIGN UP TO RECEIVE ALL MY NEW RECIPES BY EMAIL!